PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr7P20990_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family TCP
Protein Properties Length: 268aa    MW: 28663 Da    PI: 9.1674
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr7P20990_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP127.31.5e-3954141288
                    TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 
                            ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s + s+s+ s++
  GSMUA_Achr7P20990_001  54 PPKRSSNKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRGSGSSVSAP 141
                            789******************************************************************9886444444444433333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036348.7E-3959175IPR005333Transcription factor, TCP
PROSITE profilePS5136927.84560114IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0008283Biological Processcell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0010229Biological Processinflorescence development
GO:0010252Biological Processauxin homeostasis
GO:0031540Biological Processregulation of anthocyanin biosynthetic process
GO:0042023Biological ProcessDNA endoreduplication
GO:0048467Biological Processgynoecium development
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MEGEPGGSRR PNFPLQLLEK KEEDSCSSSA YPSLAISSTT AAGEIAADRL RKPPPKRSSN  60
KDRHTKVEGR GRRIRMPALC AARVFQLTRE LGHKTDGETI EWLLQQAEPA VIAATGTGTI  120
PANFTSLNIS LRGSGSSVSA PSHLRAANYF GGVAAAHPGP SLRFHNEWEH MVGSSNQSIW  180
TFPQAANASM LRGSMSGGLH FMNIPTPMAL LPSQQLGLGS GGGEGYTGIP SALNMYRSSP  240
SNSEAMQSMT QQSHRDSERH DTMSTSDS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00224DAPTransfer from AT1G69690Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009410394.11e-119PREDICTED: transcription factor TCP15-like
SwissprotQ9C9L27e-57TCP15_ARATH; Transcription factor TCP15
TrEMBLM0TJD60.0M0TJD6_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr7P20990_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37443479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.13e-54TCP family protein